move contact order calculation example into doc/stride.doc

11 years ago · 51b3f1890c
parent bcc47b09ea
commit 51b3f1890c
2 changed files with 19 additions and 17 deletions
--- a/17
+++ b/17
@ -1,17 +0,0 @@
-
-Whole PDB entry:
-
-stride 1bed.brk -$ -k
-
-Residue range:
-
-stride 2gsq.brk -$ -k -x76 -y202
-
-Single chain:
-
-stride 1alv.brk -$ -k  -ra
-
-Residue range in a chain:
-
-stride 1bmt.brk -$ -k  -ra -x651 -y740
-
--- a/doc/stride.doc
+++ b/doc/stride.doc
@ -186,6 +186,25 @@

 			       stride 2gls.brk -rabc -cc -o

+       Examples for contact order calculations:
+
+
+	 1. Whole PDB entry:
+
+				  stride 1bed.brk -$ -k
+
+	 2. Residue range:
+
+			     stride 2gsq.brk -$ -k -x76 -y202
+
+	 3. Single chain:
+
+			       stride 1alv.brk -$ -k  -ra
+
+	 4. Residue range in a chain:
+
+			 stride 1bmt.brk -$ -k  -ra -x651 -y740
+


       6.  Output format